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What is a LIMS System? LIMS vs ELN vs ZAGENO Explained

Written by ZAGENO | September 26, 2025

What is a LIMS system?

In today’s labs, a Lab Information Management System (LIMS) has become a must-have for managing data, workflows, and compliance. But while a LIMS is powerful, it’s not the end all be all. Many labs discover that a LIMS alone doesn’t cover procurement or supply chain management, two areas critical for keeping science moving.

ZAGENO’s biotech procurement platform integrates with LIMS and ELNs to extend their value. In this article, we’ll explain what a LIMS is, what it does, how it compares to other lab systems, and how ZAGENO fits into the bigger picture of a fully connected lab ecosystem.

What is a LIMS system used for?

A LIMS is used to manage and track all data and documentation related to lab operations. Typical applications include:

  • Sample management and tracking: Create a complete audit trail, from sample receipt through disposal.
  • Inventory management: Monitor lab supplies and scientific instruments to avoid overstocking or shortages.
  • Workflow management: Standardize laboratory processes across teams.
  • Compliance support: Maintain quality control and regulatory compliance with built-in SOP enforcement.

Key features of a LIMS solution

When evaluating LIMS software, look for systems that offer:

  • Sample management and tracking
  • Lab automation (integrates with instruments and robotics)
  • Instrument integration (real-time data capture and reporting)
  • Electronic Lab Notebooks (ELNs) for digital experiment records
  • Quality control features to enforce SOPs
  • Workflow standardization to ensure consistency
  • Comprehensive reporting for audits, finance, and project updates

Benefits of using a LIMS system

Adopting a LIMS system offers clear advantages:

  • Increases efficiency and productivity by centralizing data and automating repetitive tasks
  • Reduces errors by eliminating manual transcription and duplicate data entry
  • Improves accessibility with cloud-based access from any location
  • Cuts costs by optimizing lab inventory and streamlining purchasing processes
  • Enhances collaboration across departments with shared data access
  • Supports scalability as labs expand or integrate new instruments

LIMS vs. ELN: What’s the difference?

A LIMS focuses on managing lab data, samples, and workflows at the organizational level, while an Electronic Lab Notebook (ELN) records individual experiments and protocols.

  • LIMS = operations and compliance backbone
  • ELN = digital replacement for paper lab notebooks

Many modern solutions combine both, but understanding their roles helps labs choose the right mix of tools.

LIMS vs. ELN vs. ZAGENO: How they work together

Tool
Core Function
Best For
Limitations
How ZAGENO Complements It
LIMS
Manages samples, lab data, workflows, and compliance
Lab operations & quality management
Often siloed from procurement; complex to customize
ZAGENO integrates with LIMS to sync inventory and automate supply reordering
ELN
Digital notebook for experiments & protocols
Scientists recording methods & results
Doesn’t manage inventory, procurement, or compliance at scale
ZAGENO connects ELNs to suppliers, ensuring experiments have the right materials
ZAGENO
Procurement platform for lab supplies & vendor management
R&D, procurement, and finance teams
Doesn’t manage lab workflows or experimental data
Works alongside LIMS and ELNs to unify operations with supply chain management

This stack — LIMS + ELN + ZAGENO — creates a connected lab ecosystem that covers data, workflows, and procurement.

How ZAGENO complements your LIMS

A LIMS manages internal data and workflows. But procurement often remains disconnected. That’s where ZAGENO’s biotech procurement platform steps in.

With direct integration into your LIMS or ELN, ZAGENO enables:

  • Automatic supply reordering when items run low
  • Predictive analytics to prevent stockouts
  • Centralized purchasing with one metacart, one PO, one invoice

Together, your LIMS + ZAGENO form a fully synchronized lab ecosystem, connecting data management with procurement for maximum efficiency.

FAQs about LIMS, ELN, and ZAGENO

 

Ready to optimize your lab?

A LIMS system is essential, but it isn’t designed to manage procurement. By integrating ZAGENO’s life sciences procurement platform with your LIMS or ELN, you connect internal workflows with external suppliers, giving you automated ordering, predictive stock analytics, and access to 40M+ SKUs from 5,000+ vendors.