Lab Pulse | Smarter Science

Top Lab Management Tools & Software for 2025

Why the right tools matter for lab managers

We see how many hats lab managers wear today: scientist, project manager, procurement lead, compliance officer. That’s why the right lab management tools in 2025 aren’t just nice-to-have, they’re essential. But with so many platforms and resources available, which ones are truly worth your time and budget?

As the leading biotech procurement platform, ZAGENO supports hundreds of biotech and pharma organizations worldwide, helping lab managers streamline sourcing and keep research moving forward. 

We’ve rounded up the top tools every lab manager should know in 2025, from LIMS and ELNs to open-access platforms and professional development resources, so you can stay organized, productive, and confident while balancing all of those hats.

1. Best lab management software in 2025

Laboratory Information Management Systems (LIMS) and related platforms are at the core of efficient lab operations. Interest in solutions like lab management software and lab inventory management software continues to grow, as more managers look for ways to upgrade systems and improve efficiency.

Top lab software: Quick comparison

Software
Best For
Key Features
Ideal User
Collaboration
Sample tracking, ELN, workflow automation, integrations
Biotech & pharma R&D
Research labs
Inventory, protocol management, data visualization
Small to midsize labs
Open-source flexibility
Specimen tracking, assay integration, workflow automation
Academic & clinical labs
User experience
Sample lifecycle management, ELN, reporting
Mid-to-large pharma & CROs
Customization
Workflow automation, extensive configuration options
Enterprise labs
Compliance
Regulatory features, mobile access, analytics
Clinical & regulated labs


Why it matters: Choosing the right lab management software is critical for reducing administrative workload. Pairing it with ZAGENO’s procurement platform saves lab managers an average of 6.5 hours per week on ordering and supplier communication.

2. Electronic Lab Notebooks (ELNs)

Electronic Lab Notebooks replace paper notebooks with digital documentation for experiments, protocols, and results. They’re now standard in both academic and commercial labs, but the best choice depends on your lab’s size, workflows, and compliance needs.

Leading ELNs in 2025

  • LabArchives. Widely used in academia, government, and industry. Known for collaboration features, searchable experiment records, and institutional compliance.
  • Labfolder. Clean interface and strong regulatory support. Favored by labs that need to meet FDA 21 CFR Part 11 and GLP requirements.
  • Labstep. Designed for productivity. Connects experiments directly to inventory and integrates with other lab software, making it appealing for startups or growing labs.
  • LabWare ELN. Part of the larger LabWare LIMS ecosystem, ideal for enterprise-scale labs needing end-to-end integration.
  • RSpace. Flexible and integration-friendly (Dropbox, GitHub, protocols.io). Fits well for multidisciplinary research teams.
  • SciNote. Focused on workflow automation and project management, with strong compliance features for reproducibility.
  • eLabJournal. Combines ELN, inventory, and protocol management in one package. Popular in Europe and among biotech startups.
  • Signals Notebook. Enterprise-grade, cloud-based ELN. Strong adoption in pharma and biopharma with advanced chemistry/biology modules.

Why it matters: ELNs do more than digitize notebooks. They improve compliance, streamline workflows, and reduce audit stress. The right ELN can help teams work faster and collaborate more effectively. 

Learn how ZAGENO seamlessly integrates with ELN, LIMS, P2P and ERP platforms.

3. Open access research platforms

Keeping up with new science is easier when barriers are removed. Open-access research platforms let lab managers and their teams stay current without subscription costs. But simply knowing where to look isn’t enough,  the real value comes from how you use them.

Top platforms in 2025 

Platform
What It Offers
Insider Tip
Extensive biomedical literature and peer-reviewed articles
Use the “Similar articles” filter to uncover lesser-known but relevant studies for protocol validation.
Preprints in genomics, bioinformatics, and more
Set up subject alerts to get notified as soon as a preprint drops in your field.
Networking, publications, and Q&A with researchers
Use the “Request full text” feature to connect directly with authors and spark collaborations.
Broad-scope open-access journal with strong data sharing
Check the data availability statements for links to raw datasets useful in benchmarking or AI/ML training.
Rapid publishing with transparent peer review
Follow version updates to see how reviewer feedback evolves the research in real time.


Why it matters: Open research helps labs adapt faster, but the key is filtering signal from noise. Lab managers who set up alerts, leverage data availability, and build author connections can stay months ahead. When it comes time to source supplies for new experiments, ZAGENO’s AI-driven metasearch makes it simple to match protocols with available products.

4. Science podcasts and webinars

On-demand learning keeps lab managers connected to new methods and strategies. Listen on your commute or in the gym. 

Recommended in 2025:

Podcast/Webinar
Why It’s Relevant
Biotech leaders on genomics, automation, and computational biology
Founders and investors discuss challenges in scaling labs
ASCP's podcast for all things laboratory. 
Timely scientific discoveries with lab relevance
Broader biotech community, strong R&D insights
Lab supply purchasing advice and strategies for scientists, procurement specialists, finance professionals, and lab operations managers

Why it matters: Podcasts and webinars give lab managers direct access to thought leaders and peers without leaving the lab. Choosing a few high-value channels helps managers bring fresh ideas into operations and procurement strategies.

5. Online lab management communities

Like gathering around the water cooler in the old days, Reddit and other forums provide informal spaces where lab managers troubleshoot, share experiences, and trade advice.

Popular Subreddits:

Why it matters: Sometimes it can be lonely in the lab, so online forums are great for sharing experiences and lessons learned. 

6. Professional development resources

Continuous learning helps lab managers sharpen leadership and operational skills.

Top 2025 options:

Why it matters: Training makes managers more effective leaders, but first you need the time to be able to attend. Procurement efficiency is a tool to free up time for people and strategy. For example, ZAGENO customers save up to 70% of time on 3-way matching, freeing managers to focus on higher-value work.

Bringing it all together with ZAGENO

The right combination of lab management tools can make the difference between a lab that struggles to keep up and one that runs smoothly, efficiently, and with fewer bottlenecks. Every lab manager needs to decide which tools are worth their time and budget in 2025.

As the leading lab supply marketplace, ZAGENO helps ensure that procurement doesn’t hold you back. By consolidating sourcing across 40M+ SKUs from 5,000+ suppliers, automating approvals and tracking, and saving hours each week on supply management, ZAGENO frees lab managers to get the most out of every other tool they rely on, while integrating seamlessly with the platforms most labs already use.  

Request a demo of ZAGENO and see how leading labs are simplifying procurement and accelerating research.

Frequently asked questions (FAQ)

  1. What is lab management software used for?
    Lab management software organizes data, tracks samples, and streamlines workflows, making labs more efficient and compliant.
  2. Which is the best lab management software in 2025?
    It depends on your lab type. Benchling is best for biotech R&D, STARLIMS for compliance-heavy labs, and Labguru for smaller research teams.
  3. What’s the difference between LIMS and ELN?
    A LIMS focuses on managing samples, workflows, and compliance. An ELN is primarily for documenting experiments and protocols. Many labs use both.

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